研究动态
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编辑来信:尿液DNA在尿路上皮癌无创检测和最小残留病监测中的临床应用。

Letter to the Editor: clinical utility of urine DNA for noninvasive detection and minimal residual disease monitoring in urothelial carcinoma.

发表日期:2023 Feb 04
作者: Kaiwei Yang, Hailong Hu, Junlong Wu, Huina Wang, Zhaoxia Guo, Wei Yu, Lin Yao, Feng Ding, Tao Zhou, Wang Wang, Yunkai Wang, Lei Liu, Jing Guo, Shuaipeng Zhu, Xinhao Zhang, Shanbo Cao, Feng Lou, Yuanjie Niu, Dingwei Ye, Zhisong He
来源: Molecular Cancer

摘要:

当前,对于尿路上皮癌(UC)的早期检测和最小残留疾病(MRD)监测的方法具有侵入性和/或灵敏度不足的缺点。我们开发了一种高效的工作流程,命名为尿液肿瘤DNA多维生物信息学预测器(utLIFE)。通过使用UC特异性突变和大的拷贝数变异,utLIFE-UC模型在膀胱癌队列 (n = 150) 中开发,并在癌症基因组图谱 (TCGA) 膀胱癌队列 (n = 674) 和上尿路UC队列 (n = 22) 中进行了验证。utLIFE-UC模型能够区分92.8%的UC,具有96.0%的特异性,在BLCA_TCGA和UTUC队列中进行了可靠的验证。此外,与细胞学相比,utLIFE-UC提高了膀胱癌检测的灵敏度(p<0.01)。在MRD队列中,utLIFE-UC能够区分所有残留疾病的患者,显示了与细胞学(p<0.01)和荧光原位杂交(p<0.05)相比更高的灵敏度。本研究表明,utLIFE-UC可以用于在早期癌症或MRD的患者中高灵敏度和高特异性地检测UC。utLIFE-UC是一种经济实惠、快速、高通量、无创和有前途的方法,可减轻膀胱镜检查和盲目手术的负担。© 2023作者。
Current methods for the early detection and minimal residual disease (MRD) monitoring of urothelial carcinoma (UC) are invasive and/or possess suboptimal sensitivity. We developed an efficient workflow named urine tumor DNA multidimensional bioinformatic predictor (utLIFE). Using UC-specific mutations and large copy number variations, the utLIFE-UC model was developed on a bladder cancer cohort (n = 150) and validated in The Cancer Genome Atlas (TCGA) bladder cancer cohort (n = 674) and an upper tract urothelial carcinoma (UTUC) cohort (n = 22). The utLIFE-UC model could discriminate 92.8% of UCs with 96.0% specificity and was robustly validated in the BLCA_TCGA and UTUC cohorts. Furthermore, compared to cytology, utLIFE-UC improved the sensitivity of bladder cancer detection (p < 0.01). In the MRD cohort, utLIFE-UC could distinguish 100% of patients with residual disease, showing superior sensitivity compared to cytology (p < 0.01) and fluorescence in situ hybridization (FISH, p < 0.05). This study shows that utLIFE-UC can be used to detect UC with high sensitivity and specificity in patients with early-stage cancer or MRD. The utLIFE-UC is a cost-effective, rapid, high-throughput, noninvasive, and promising approach that may reduce the burden of cystoscopy and blind surgery.© 2023. The Author(s).