肝细胞癌中非凋亡 RCD 组的串扰揭示了预后和治疗优化。
Crosstalk of non-apoptotic RCD panel in hepatocellular carcinoma reveals the prognostic and therapeutic optimization.
发表日期:2024 Jun 21
作者:
Shuo Li, Yaqi Xu, Xin Hu, Hao Chen, Xiaodan Xi, Fei Long, Yuan Rong, Jun Wang, Chunhui Yuan, Chen Liang, Fubing Wang
来源:
Epigenetics & Chromatin
摘要:
肿瘤细胞的非凋亡调节细胞死亡(RCD)深刻影响肿瘤进展,并在确定对免疫检查点抑制剂(ICIs)的反应中发挥关键作用。根据从数据库和文献中获得的 507 个非凋亡 RCD 基因的表达,通过共识聚类分析来鉴定预后独特的 HCC 亚型。同时,集成一套生物信息学工具来分析两种亚型内肿瘤免疫微环境浸润、基因突变、拷贝数变异和表观遗传学改变的差异。最后,构建了非凋亡 RCDRS 特征,并在 HCC 患者组织中评估了其可靠性。与低 RCDRS 亚组相比,高 RCDRS HCC 亚组的总生存率显着较低,对 ICI 的敏感性较低,但对顺铂、紫杉醇和索拉非尼的敏感性较高。总体而言,我们建立了一个由四个非凋亡 RCD 基因组成的 RCDRS 组合,这可能是评估 HCC 预后、指导治疗决策并最终改善患者预后的有希望的预测因子。© 2024 作者。
Non-apoptotic regulated cell death (RCD) of tumor cells profoundly affects tumor progression and plays critical roles in determining response to immune checkpoint inhibitors (ICIs). Prognosis-distinctive HCC subtypes were identified by consensus cluster analysis based on the expressions of 507 non-apoptotic RCD genes obtained from databases and literature. Meanwhile, a set of bioinformatic tools was integrated to analyze the differences of the tumor immune microenvironment infiltration, genetic mutation, copy number variation, and epigenetics alternations within two subtypes. Finally, a non-apoptotic RCDRS signature was constructed and its reliability was evaluated in HCC patients' tissues. The high-RCDRS HCC subgroup showed a significantly lower overall survival and less sensitivity to ICIs compared to low-RCDRS subgroup, but higher sensitivity to cisplatin, paclitaxel, and sorafenib. Overall, we established an RCDRS panel consisting of four non-apoptotic RCD genes, which might be a promising predictor for evaluating HCC prognosis, guiding therapeutic decision-making, and ultimately improving patient outcomes.© 2024 The Author(s).