研究动态
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儿科伯基特淋巴瘤的单细胞转录组学揭示了肿瘤内异质性和治疗耐药性标志物。

Single-cell transcriptomics of pediatric Burkitt lymphoma reveals intra-tumor heterogeneity and markers of therapy resistance.

发表日期:2024 Oct 18
作者: Clarissa Corinaldesi, Antony B Holmes, Gaia Martire, Anna Tosato, Domenico Rizzato, Federica Lovisa, Ilaria Gallingani, Qiong Shen, Lavinia Ferrone, Marian Harris, Kimberly Davies, Luca Molinaro, Umberto Mortara, Angelo Paolo Dei Tos, Kenneth Ofori, Emanuele S G D'Amore, Roberto Chiarle, Bo Ngan, Elisa Carraro, Marta Pillon, Shafinaz Hussein, Govind Bhagat, Marco Pizzi, Lara Mussolin, Katia Basso
来源: LEUKEMIA

摘要:

伯基特淋巴瘤 (BL) 是儿童患者中最常见的 B 细胞淋巴瘤。虽然大多数患者已治愈,但其中一小部分对治疗有抵抗力。为了研究 BL 异质性以及区分治疗反应者 (R) 和无反应者 (NR) 的特征,我们通过单细胞 (sc) 转录组学诊断 EBV 阴性 BL 样本进行分析。对非肿瘤成分的分析显示,免疫细胞占主导地位,成纤维细胞占少数,富含 NR。肿瘤表现出患者特异性特征,以及表达与细胞周期、信号通路和细胞起源特征相关的转录本的共享亚群。一些转录本在 R 与 NR 中表达存在差异。最重要的候选者原肌球蛋白 2 (TPM2) 是原肌球蛋白肌动蛋白丝结合蛋白家族的成员,已被证实在转录物和蛋白质水平上的 NR 均显着较高。基于诊断时 TPM2 表达的患者分层与预后显着相关,与 TP53 突变无关。这些结果表明 BL 显示转录异质性并识别治疗耐药性的候选生物标志物。© 2024。作者。
Burkitt lymphoma (BL) is the most frequent B-cell lymphoma in pediatric patients. While most patients are cured, a fraction of them are resistant to therapy. To investigate BL heterogeneity and the features distinguishing therapy responders (R) from non-responders (NR), we analyzed by single-cell (sc)-transcriptomics diagnostic EBV-negative BL specimens. Analysis of the non-tumor component revealed a predominance of immune cells and a small representation of fibroblasts, enriched in NR. Tumors displayed patient-specific features, as well as shared subpopulations that expressed transcripts related to cell cycle, signaling pathways and cell-of-origin signatures. Several transcripts were differentially expressed in R versus NR. The top candidate, Tropomyosin 2 (TPM2), a member of the tropomyosin actin filament binding protein family, was confirmed to be significantly higher in NR both at the transcript and protein level. Stratification of patients based on TPM2 expression at diagnosis significantly correlated with prognosis, independently of TP53 mutations. These results indicate that BL displays transcriptional heterogeneity and identify candidate biomarkers of therapy resistance.© 2024. The Author(s).